Systems Biology Center New York: Resources

Funding SBCNY is supported by Grant Number P50GM071558 from the National Institute of General Medical Sciences.

Goals of the Center Contact Us NIGMS Centers Systems Biology Center

Bromberg KD, Ma'ayan A, Neves SR, Iyengar R. Design logic of a cannabinoid receptor signaling network that triggers neurite outgrowth. Science 2008;320(5878):903-9.

PubMed Abstract

Berger SI, Posner JM, Ma'ayan A. Genes2Networks: Connecting lists of gene symbols using mammalian protein interactions databases. BMC Bioinformatics 2007;8:372.

PubMed Abstract

PHARMACOGENOMICS:

Powerpoint presentations of lectures from the Spring 2008 course.

Goals of the Center

Training Programs Courses Seminars Outreach

Bioinformatic Tools Database & Datasets Publications

RESOURCES

Bioinformatic Tools

AVIS AJAX Viewer for Signaling Networks

Genes2Networks

MOOSE (Multiscale Object Oriented Simulation Environment)

SAVI (Signaling Analysis and Visualization)

Description of Tools

Database and Datasets

DOQCS (Database of Quantitative Cellular Signaling)

Regulatory Networks Represented as Directed Graphs

Datasets for download

Publications

Published papers from the Systems Biology Center New York

Bromberg KD, Ma'ayan A, Neves SR, Iyengar R. Design logic of a cannabinoid receptor signaling network that triggers neurite outgrowth. Science 2008;320(5878):903-9.
Abstract

Lipshtat A, Purushothaman SP, Iyengar R, Ma'ayan A. Functions of Bifans in Context of Multiple Regulatory Motifs in Signaling Network. Biophys J. 2008;94(7):2566-79.
Abstract

More Publications